CDS

Accession Number TCMCG017C06386
gbkey CDS
Protein Id OMP06676.1
Location complement(join(4192..4546,4638..4873,4975..5147,5652..5702,6355..6718))
GeneID InterPro:IPR002060
Organism Corchorus olitorius
locus_tag COLO4_07983

Protein

Length 392aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013543.1
Definition Squalene/phytoene synthase [Corchorus olitorius]
Locus_tag COLO4_07983

EGGNOG-MAPPER Annotation

COG_category I
Description Phytoene synthase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R02065        [VIEW IN KEGG]
R04218        [VIEW IN KEGG]
R07270        [VIEW IN KEGG]
R10177        [VIEW IN KEGG]
KEGG_rclass RC00362        [VIEW IN KEGG]
RC01101        [VIEW IN KEGG]
RC02869        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
KEGG_ko ko:K02291        [VIEW IN KEGG]
EC 2.5.1.32        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.5.1.99        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01062        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01062        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGGTGTTCTTCTTTGGGTTATTTCTCCCAAAGAGAATGCCACGGCTTTGCTGAGTTTGATACCCAGGAGTGGTGGGAAACAGAAGAGGTCTTCAAGATTGTGTTCGAGGATCAAGTTTTCCACTAAGGTCTCAGCTATTTCAAGTGCAGTTGCTAACCCTGCAAGATCTTCGGAAGAGAAGGTTTATGAGGTGGTTTTAAAGCAGGCTGCTTTGGTTAAAGAACAGAGGAAAAAGAAAGCTTTGGATTTGGAAAGAGCAGCTGAAAATTCTGATGCTTTGACTGATTGGGATCTCTTGAATGAAGCTTATGATAGGTGTGGTGAAGTTTGTGCTGAGTATGCTAAGACTTTTTACTTGGGAACATTACTTATGACACCGGAGCGGCGGAGAGCTGTCTGGGCAATCTATGTGTGGTGTAGAAGGACTGATGAACTTGTAGATGGACCTAATGCTTCACACATTACACCCAGGGCTCTTGACAGATGGGAGAAAAGATTAGATGACCTTTATGAAGGTCGTCCTTACGATATGTTTGATGCTGCTTTATCTGATACAGTCTCGAAGTACCCTGTAGATATACAGCCCTTCAAGGACATGGTAGAGGGAATGAGGTTAGATTTGAGGAAATCAAGATATAATACCTTTGATGAGCTCTACCTATATTGCTACTATGTTGCTGGGACAGTGGGACTAATGAGTGTTCCAGTAATGGGGATTGCACCTGAATCAAAGGCGACGACAGAAAGTGTCTACAATGCTGCATTAGCCCTTGGAATTGCTAATCAGCTAACAAATATACTTAGAGATGTTGGTGAAGATGCTAGGAGAGGAAGAATATATTTACCACAGGATGAACTAGCACGCGCTGGCCTATCAGACGAGGACATATTTCGAGGTCAAGTAACAGACAAGTGGAGAAGTTTTATGAAAGATCAAATAAAAAGAGCGAGGATGTTCTTTGATGAGGCTGAAAAAGGTGTTTCAGAGCTAAATGCAGCTAGCAGATGGCCGGTGTGGGCATCGCTGTTGTTATATCGACAGATATTAGATGCCATTGAAGCAAATGATTATAACAATTTCACCAAAAGAGCTTATGTTGGCAAGGCAAAGAAATTTGCATCACTTCCTGTGGCCTATGGAAGAGCCCTCTTGGGCACTTCTAAATTATCTTGA
Protein:  
MAGVLLWVISPKENATALLSLIPRSGGKQKRSSRLCSRIKFSTKVSAISSAVANPARSSEEKVYEVVLKQAALVKEQRKKKALDLERAAENSDALTDWDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPRALDRWEKRLDDLYEGRPYDMFDAALSDTVSKYPVDIQPFKDMVEGMRLDLRKSRYNTFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELARAGLSDEDIFRGQVTDKWRSFMKDQIKRARMFFDEAEKGVSELNAASRWPVWASLLLYRQILDAIEANDYNNFTKRAYVGKAKKFASLPVAYGRALLGTSKLS